What is the average Medical Coder salary for San Diego, CA?
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As of July 01, 2026, the average Medical Coder salary in San Diego, CA is $238,487. The chart below represents localized salaries for some of our most popular Medical Coder job titles in San Diego, CA. Salaries can vary greatly depending on numerous factors, including position, location, years of experience, and level of education. Salary.com’s team of Certified Compensation Professionals analyzed survey data collected from thousands of HR departments at companies of all sizes and industries to compile a range of salaries for various Medical Coder job titles in San Diego, CA. Apply your personal criteria to one of the job titles below to get your personalized salary estimate.
Medical Coder Salaries in San Diego, CA
| Job Title | Salary | Hourly Rate | Location | Date Updated |
| VP of Medical Affairs | $369,797 | $177.79 | San Diego, CA | July 01, 2026 |
| Medical Affairs Manager | $176,493 | $84.85 | San Diego, CA | July 01, 2026 |
| Medical Affairs Director | $300,847 | $144.64 | San Diego, CA | July 01, 2026 |
| Medical Affairs Specialist III | $142,279 | $68.40 | San Diego, CA | July 01, 2026 |
| Medical Affairs Specialist IV | $184,702 | $88.80 | San Diego, CA | July 01, 2026 |
| Medical Affairs Specialist V | $242,358 | $116.52 | San Diego, CA | July 01, 2026 |
| Medical Affairs Senior Manager | $233,714 | $112.36 | San Diego, CA | July 01, 2026 |
| Medical Writer III | $138,304 | $66.49 | San Diego, CA | July 01, 2026 |
| Medical Records Coding Technician III | $71,265 | $34.26 | San Diego, CA | July 01, 2026 |
| Medical Records Coding Technician II | $64,139 | $30.84 | San Diego, CA | July 01, 2026 |
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Plans and directs all aspects of clinical trials and associated research activities for medical product development. Leads study design and execution and the collection and reporting of study data. Advises on and ensures adherence to clinical protocols. Recruits and negotiates fees with clinical investigators. Coordinates regulatory report submissions, monitors compliance, and concludes studies. May require an advanced degree. Typically reports to top management. Manages a departmental function within a broader corporate function. Develops major goals to support broad functional objectives. Approves policies developed within various sub-functions and departments. Typically requires 8+ years of managerial experience. Comprehensive knowledge of the overall departmental function. VP of Medical Affairs Salaries in San Diego, CAAlternate Job Titles:Medical Information Senior Director, VP of Medical Communications, VP of Medical Affairs
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Manages clinical trials and associated research activities for medical product development. Leads study design and execution and the collection and reporting of study data. Advises on and ensures adherence to clinical protocols. Recruits and negotiates fees with clinical investigators. Coordinates regulatory report submissions, monitors compliance, and concludes studies. May require an advanced degree. Typically reports to a director. Manages subordinate staff in the day-to-day performance of their jobs. True first level manager. Ensures that project/department milestones/goals are met and adhering to approved budgets. Has full authority for personnel actions. Typically requires 5 years experience in the related area as an individual contributor. 1-3 years supervisory experience may be required. Extensive knowledge of the function and department processes. Medical Affairs Manager Salaries in San Diego, CAAlternate Job Titles:Medical Communications Manager, Medical Information Manager, Medical Affairs Manager
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Directs clinical trials and associated research activities for medical product development. Leads study design and execution and the collection and reporting of study data. Advises on and ensures adherence to clinical protocols. Recruits and negotiates fees with clinical investigators. Coordinates regulatory report submissions, monitors compliance, and concludes studies. May require an advanced degree. Typically reports to senior management. Manages a departmental sub-function within a broader departmental function. Creates functional strategies and specific objectives for the sub-function and develops budgets/policies/procedures to support the functional infrastructure. Typically requires 5+ years of managerial experience. Deep knowledge of the managed sub-function and solid knowledge of the overall departmental function. Medical Affairs Director Salaries in San Diego, CAAlternate Job Titles:Medical Communications Director, Medical Information Director, Medical Affairs Director
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Coordinates and administers clinical trials and research activities for medical product development. Recruits investigators, negotiates study details, and oversees human trials. Coordinates regulatory report submissions, monitors compliance, and concludes studies. May require an advanced degree. Typically reports to a manager. Work is generally independent and collaborative in nature. Contributes to moderately complex aspects of a project. Typically requires 4-7 years of related experience. Medical Affairs Specialist III Salaries in San Diego, CAAlternate Job Titles:Medical Communications Specialist III, Medical Information Specialist III, Medical Affairs Specialist III
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Coordinates and administers clinical trials and research activities for medical product development. Recruits investigators, negotiates study details, and oversees human trials. Coordinates regulatory report submissions, monitors compliance, and concludes studies. May require an advanced degree. Typically reports to a manager. Work is highly independent. May assume a team lead role for the work group. A specialist on complex technical and business matters. Typically requires 7+ years of related experience. Medical Affairs Specialist IV Salaries in San Diego, CAAlternate Job Titles:Medical Communications Specialist IV, Medical Information Specialist IV, Medical Affairs Specialist IV
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Coordinates and administers clinical trials and research activities for medical product development. Recruits investigators, negotiates study details, and oversees human trials. Coordinates regulatory report submissions, monitors compliance, and concludes studies. May require an advanced degree. Typically reports to a manager. Works autonomously. Goals are generally communicated in "solution" or project goal terms. May provide a leadership role for the work group through knowledge in the area of specialization. Works on advanced, complex technical projects or business issues requiring state of the art technical or industry knowledge. Typically requires 10+ years of related experience. Medical Affairs Specialist V Salaries in San Diego, CAAlternate Job Titles:Medical Communications Specialist V, Medical Information Specialist V, Medical Affairs Specialist V
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Manages clinical trials and associated research activities for medical product development. Leads study design and execution and the collection and reporting of study data. Advises on and ensures adherence to clinical protocols. Recruits and negotiates fees with clinical investigators. Coordinates regulatory report submissions, monitors compliance, and concludes studies. May require an advanced degree. Typically reports to a director. Typically manages through subordinate managers and professionals in larger groups of moderate complexity. Provides input to strategic decisions that affect the functional area of responsibility. May give input into developing the budget. Typically requires 3+ years of managerial experience. Capable of resolving escalated issues arising from operations and requiring coordination with other departments. Medical Affairs Senior Manager Salaries in San Diego, CAAlternate Job Titles:Medical Communications Senior Manager, Medical Information Senior Manager, Medical Affairs Senior Manager
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Develops, writes, and edits medical content for various projects and initiatives. Conducts thorough research and gathers information from various sources to develop accurate and comprehensive medical documents, such as clinical study reports, protocols, and/or regulatory submissions. Reviews and interprets scientific and clinical data to effectively communicate complex medical information to different audiences. Ensures that all deliverables are in accordance with regulations, standards, and guidelines. Stays up to date with the latest developments in healthcare. Typically requires a bachelor's degree. Typically reports to a manager. Work is generally independent and collaborative in nature. Contributes to moderately complex aspects of a project. Typically requires 4-7 years of related experience. Medical Writer III Salaries in San Diego, CAAlternate Job Titles:Clinical Study Senior Medical Writer, Medical Research Writer III, Medical Writer and Editor III, Medical Writing Senior Specialist, Senior Medical Writer, Medical Writer III
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Abstracts clinical information from medical records and assigns the appropriate ICD or CPT codes using industry-standard coding guidelines. Assigns required DRG (diagnosis-related grouping) codes. Works with coding databases and software to input and maintain data according to standard procedures. Performs quality audits of work. Maintains and up-to-date knowledge of coding and documentation requirements. Requires a medical coding certification. The exact type of coding certification may vary based on the clinical setting or a medical specialty focus. May require an associate degree. The AAPC Certified Professional Coder (CPC) certification is typically required. The Certified Coding Specialist (CCS) certification is also a typical requirement. Typically reports to a supervisor or manager. Works independently within established procedures associated with the specific job function. Has gained proficiency in multiple competencies relevant to the job. Typically requires 3-5 years of related experience. Medical Records Coding Technician III Salaries in San Diego, CAAlternate Job Titles:Certified Professional Coder, Clinical Coding Specialist III, CPC, Medical Coding Specialist III- Certified, Medical Records Coder III, Medical Records Coding Technician IIICategory : Healthcare - Technicians
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Abstracts clinical information from medical records and assigns the appropriate ICD or CPT codes using industry-standard coding guidelines. Assigns required DRG (diagnosis-related grouping) codes. Works with coding databases and software to input and maintain data according to standard procedures. Performs quality audits of work. Maintains and up-to-date knowledge of coding and documentation requirements. Requires a medical coding certification. The exact type of coding certification may vary based on the clinical setting or a medical specialty focus. Requires a high school diploma. The AAPC Certified Professional Coder (CPC) certification is typically required. The Certified Coding Specialist (CCS) certification is also a typical requirement. Typically reports to a supervisor or manager. Works under moderate supervision. Gaining or has attained full proficiency in a specific area of discipline. Typically requires 1-3 years of related experience. Medical Records Coding Technician II Salaries in San Diego, CAAlternate Job Titles:Clinical Coding Specialist II, Medical Records Coder II, Medical Records Coding Specialist II- Certified, Medical Records Coding Technician IICategory : Healthcare - Technicians