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Clinical Programmer Salary in the United States

How much does a Clinical Programmer make in the United States? As of August 01, 2026, the average salary for a Clinical Programmer in the United States is $75,091 per year, which breaks down to an hourly rate of $36.

However, a Clinical Programmer's salary can vary significantly. Here's a look at the typical salary range:

  • Top Earners (90th percentile): $90,896
  • Majority Range (25th-75th percentile): $70,386 to $83,364
  • Entry-Level (10th percentile): $66,101
Salary Factors Salary-Boosting Skills Salary by Experience Related Job Salaries Top Paying Cities Explore Related Jobs

Check out Clinical Programmer Job Openings in the United States

Key Factors That Influence Clinical Programmer Salaries

A Clinical Programmer's salary isn't a fixed number. It's shaped by several important factors. Below, we'll explore how your years of experience, geographic location, education and company size can directly affect your earning potential.

How Experience Level Affects Clinical Programmer Salaries?

Experience is a primary driver of a Clinical Programmer's salary. As you build your skills and take on more complex tasks, your compensation generally increases. Here's how the average salary grows at different career stages:

  • Entry-Level (less than 1 year): $73,063
  • Early Career (1-2 years): $73,368
  • Mid-Level (2-4 years): $74,747
  • Senior-Level (5-8 years): $75,666
  • Expert (over 8 years): $75,896
Job RoleYears of ExperienceAverage Salary
Entry Level Clinical Programmer less than 1 year $73,063
Early Career Level Clinical Programmer 1-2 years $73,368
Mid-Level Level Clinical Programmer 2-4 years $74,747
Senior-Level Level Clinical Programmer 5-8 years $75,666
Expert Level Clinical Programmer over 8 years $75,896

How Do Clinical Programmer Salaries Vary from State to State?

Your salary can change significantly depending on where you work. States with a higher cost of living and strong industrial sectors often pay more to attract Clinical Programmers. For example, consider the average annual salaries in these key locations:

  • District of Columbia: $83,141.
  • California: $82,826.
  • Massachusetts: $81,722.

Top Paying Cities for Clinical Programmer

Salaries can also vary between different cities. Major metropolitan areas or cities with a high demand for technicians often offer more competitive pay. Here are a few examples of average annual salaries in different U.S. cities:

  • San Jose: $94,713
  • San Francisco: $93,676
  • Oakland: $91,701

Clinical Programmer Salary by Industry: Top Paying Sectors

For Clinical Programmer roles, the industry you choose can affect earning potential by as much as 40% (the gap between the highest and lowest paying industries). Data shows that the Healthcare and Pharmaceuticals sectors offer the strongest compensation, at 20% above the average. In contrast, Clinical Programmer positions in Edu., Gov't. & Nonprofit or Biotechnology typically offer lower base pay, as these industries often view Clinical Programmer as a support function rather than a direct revenue driver.

The top paying industries for a Clinical Programmer

Industry Sector Average Annual Salary Average Hourly Rate Pay vs.Avg
Healthcare $90,110 $43.0 20%
Pharmaceuticals $82,600 $40.0 10%

How Education impacts a Clinical Programmer's Salary?

Your level of education can impact your salary potential. While many Clinical Programmer professionals enter the field with a Associate's degree, higher education can lead to more specialized and higher-paying roles.

According to our 100% employer-reported salary data, the median salary for a Clinical Programmer with a Associate's is between $67,620 and $71,591.

Clinical Programmer Salaries by Degree Level

Typical Education for Clinical Programmer
Degree Level % of user with this level of education
No Degree 2.3%
High School 39.5%
Associate's Degree 2.3%
Bachelor's Degree 39.5%
Master's Degree or MBA 53.5%
JD, MD, PhD or Equivalent 4.7%
View as Graph

Clinical Programmer Salary: Hourly Rate, Weekly Pay, and Monthly Pay

Understanding how a Clinical Programmer's annual salary breaks down can help with budgeting. Below, you can see the average hourly rate, weekly pay, and monthly pay for this role. Use the buttons to switch between different pay periods.

  • Hourly
  • Monthly
  • Weekly
  • Yearly
  • Table View
Last Updated on August 01, 2026
$70,386
Average $75,091/year
$83,364
$5,865
Average $6,258/month
$6,947
$1,354
Average $1,444/week
$1,603
$34
Average $36/hour
$40
Annual Salary Monthly Pay Weekly Pay Hourly Wage
75th Percentile $83,364 $6,947 $1,603 $40
Average $75,091 $6,258 $1,444 $36
25th Percentile $70,386 $5,865 $1,354 $34

Most common benefits for Clinical Programmer

  • Social Security
  • 401 (k)
  • Disability
  • Healthcare
  • Pension
  • Time Off (days)

Common company salaries for Clinical Programmer

Here are companies hiring for Clinical Programmer and their salaries, click below for more details.

Find Your Next Clinical Programmer Job

Ready to take the next step in your career? Browse thousands of current Clinical Programmer job openings on our job board. Use the search bar below to find your perfect match.

  • Confidential | Columbus, OH

    Associate Vice President Internal Communications

    Confidential | Columbus, OH

    Associate Vice President, Internal Communications. About the Company. National consulting & advisory services firm focused on the healthcare industry. Indu... more

    20 Days Ago

  • C.R. England | Columbus, OH

    Local CDL

    C.R. England | Columbus, OH

    Job Description. C.R. England is Now Urgently Hiring Local Dedicated CDL-A Truck Drivers. \n. Dedicated Local Fleet - Home Daily - Competitive Pay* - Full ... more

    25 Days Ago

  • Confidential | Columbus, OH

    Vice President Credit Risk Strategy&Data Science

    Confidential | Columbus, OH

    Vice President, Credit Risk Strategy & Data Science. About the Company. High-growth SMB lender building the next generation of credit decisioning. Industry... more

    25 Days Ago

  • Confidential | Columbus, OH

    Vice President Payments Engineering

    Confidential | Columbus, OH

    Vice President, Payments Engineering. About the Company. Globally-recognized provider of corporate payment solutions. Industry. Financial Services. Type. P... more

    27 Days Ago

  • Confidential | Columbus, OH

    Senior Vice President of Project Delivery

    Confidential | Columbus, OH

    Senior Vice President of Project Delivery. About the Company. A multi-billion-dollar construction organization with collaborative, servant-minded leadershi... more

    27 Days Ago

  • USPS | Columbus, OH

    USPS Postal Workers

    USPS | Columbus, OH

    The United States Postal Service (USPS) is seeking Mail Carriers and City Carrier Assistants (CCA) to deliver mail and packages to residential and business... more

    1 Month Ago

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FAQ about Clinical Programmer

1. What industry pays the highest salary for Clinical Programmer?

The Healthcare industry offers the highest average compensation for Clinical Programmer roles, with salaries approximately 20% above the market median.

Where Does Our Salary Data Come From?

Salary.com provides salary estimates, histograms, trends, and comparisons using data from employer job postings and third-party sources.

We offer detailed salary information across multiple percentiles for your reference. (Click here to learn Why the Salary Midpoint Formula Is Crucial for Achieving Pay Equity.)

With the most extensive online, real-time compensation data available, Salary.com helps you pinpoint your exact pay target.

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